Useful Links
Note, these links will navigate you away from ECU managed websites. We are not responsible for the content hosted on external websites.
- American Society for Mass Spectrometry (http://www.asms.org)
- Consortium for Top-Down Proteomics (http://www.topdownproteomics.org)
- Scripps Center for metabolomics (https://masspec.scripps.edu/learn/ms/)
- Mass Spectrometry definitions and terms (https://sites.psu.edu/msproteomics/ms-101/ms-terms/)
Proteomics and Structural Proteomics
- FragPipe (https://fragpipe.nesvilab.org/)
- MaxQuant (http://www.maxquant.org)
- Protparam (https://web.expasy.org/protparam)
- Peptide cutter (https://web.expasy.org/peptide_cutter)
- ProteinProspector (http://prospector.ucsf.edu/prospector/mshome.htm)
- Mascot (http://www.matrixscience.com/search_form_select.html)
- Mass Lynx (http://www.waters.com/waters/en_GB/MassLynx-Mass-Spectrometry-Software-/nav.htm?cid=513164&locale=en_GB)
- DynamX HDX Data Analysis Software 3.0 (https://www.waters.com/waters/library.htm?locale=en_US&lid=134832928)
Metabolomics
- MarkerView (https://sciex.com/products/software/markerview-software)
- MZmine 3 (http://mzmine.github.io/)
- MetaboAnalyst (https://www.metaboanalyst.ca/MetaboAnalyst/ModuleView.xhtml)
- Human Metabolome database (https://hmdb.ca/)
- METLIN (https://metlin.scripps.edu/)
- Mass spectrometry Contaminant Database (https://www.maconda.bham.ac.uk/)
- CRAPome (https://reprint-apms.org/?q=chooseworkflow)
- Interference’s & Contaminants Encountered in Modern Mass Spectrometry (Boston college, https://www.bc.edu/bc-web/schools/mcas/departments/chemistry/research/facil-inst/mass-spec-background-ions.html)
- ACD/Labs (https://www.acdlabs.com/blog/mass-spectrometry/common-adduct-and-fragment-ions-in-mass-spectrometry/)
- NIST Mass and Fragment Calculator Software (https://www.nist.gov/services-resources/software/nist-mass-and-fragment-calculator-software)